PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN14133.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 189aa MW: 22566.7 Da PI: 10.6383

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN14133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.7	2.4e-17	32	77	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v q+G+ +W+ Ia++++ gR++k+c++rw++ PIN14133.1 32 RGHWRPAEDEKLRQLVLQYGPQNWNFIAQKLQ-GRSGKSCRLRWFNQ 77 899***************************.*********996 PP
2	Myb_DNA-binding	58	2.1e-18	84	127	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ a++ +G++ W++I+r ++ gRt++ +k++w+ PIN14133.1 84 RRPFSEEEEERLLAAHRIHGNK-WALISRFFP-GRTDNAVKNHWHV 127 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MPLRYDFELV NWKSTMEEAC RGSSDYARNG LRGHWRPAED EKLRQLVLQY GPQNWNFIAQ 60 KLQGRSGKSC RLRWFNQLDP RINRRPFSEE EEERLLAAHR IHGNKWALIS RFFPGRTDNA 120 VKNHWHVIMA RKQRETSKLY GKMMIRSTTH ADNIINFVNY NNISHPNYTF GRRIINQECK 180 IMRSNMAQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	4e-63	MYB family protein