PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN14184.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 238aa    MW: 27128.3 Da    PI: 9.0758
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN14184.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3103.21.4e-32461471100
                 EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 f+k ltpsdv+k++rlv+pk++ae++   +g+  ++++l++ede g+ W+++++y+++s++yvltkGW+++vk++gL++gD+v+F ++ r++++l+v++
  PIN14184.1  46 FEKLLTPSDVGKLNRLVIPKQHAERNfpmNGDRDNGIMLSFEDEVGKLWTFRYSYWGSSQSYVLTKGWSGYVKDKGLDAGDSVLFGRH-RENGRLFVGW 143
                 99***************************7788899**************************************************64.49999***** PP

                 E-SS CS
          B3  97 frks 100
                 +rk+
  PIN14184.1 144 RRKN 147
                 *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MSIPIFYGGA TTFNYNFYNK KEQELLEEQL VINNQFYYEI PKEPLFEKLL TPSDVGKLNR  60
LVIPKQHAER NFPMNGDRDN GIMLSFEDEV GKLWTFRYSY WGSSQSYVLT KGWSGYVKDK  120
GLDAGDSVLF GRHRENGRLF VGWRRKNGEV SGGGWWSRHG GSSSAYCPRT GRSGNPKKLR  180
LFGVNMEWGS EPSAQEGSSM SSQGRAHQHL CGRCCMNHRT PLEEDNVNFS GGHVHWRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.17e-55B3 family protein