PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN14185.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 207aa    MW: 23495.5 Da    PI: 9.2017
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN14185.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B393.21.9e-2939138198
                 EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 f+k ltpsdv+k++rlv+pk+ ae++   +g+  ++++l++ed+ g+ W+++++y+++s++yvlt GW+++vk++gL++gD+v+F +++ ++++l+v++
  PIN14185.1  39 FEKLLTPSDVGKLNRLVIPKQPAERNfpmNGDRDNGIMLSFEDKVGKMWSFRYSYWGSSQSYVLTIGWSGYVKDKGLDAGDSVLFGRHR-ESGRLFVGW 136
                 99***************************7788899**************************************************644.9999****9 PP

                 E- CS
          B3  97 fr 98 
                 + 
  PIN14185.1 137 RL 138
                 85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MSIPIFSYNF YNKNELELLE EQFVINNQFC YEIPQEPLFE KLLTPSDVGK LNRLVIPKQP  60
AERNFPMNGD RDNGIMLSFE DKVGKMWSFR YSYWGSSQSY VLTIGWSGYV KDKGLDAGDS  120
VLFGRHRESG RLFVGWRLKN GEVSGGGWWS RHGGSSSAYC PRAGANYRKG YIYGNPKKLR  180
LFGVNMEWGS EPSAQEGSSM LSQGRAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.13e-51B3 family protein