PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN14225.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family TCP
Protein Properties Length: 284aa    MW: 32578.4 Da    PI: 9.7657
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN14225.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP128.66.3e-401052583137
         TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...........ssssasec..eaesssssasnsssg 88 
                  kkdrhski T++g+RdRR+Rls+++a++fFdLqd+LG+dk+s t++WLl++a p+i el ++           +  sas++  ++++  ss  n+s +
  PIN14225.1 105 SKKDRHSKIKTARGLRDRRMRLSLDVARKFFDLQDMLGYDKASRTVDWLLTKAMPSIRELERSrgsvcslvgtaN--SASSTsvDDGNVASSPINQSTT 201
                 59*************************************************************999999998542..3323323333333333333333 PP

         TCP  89 .........kaaksaakskksqksaasalnlakesrakarararertrekmriknkln 137
                          +++ s+ k+ k+  +     ++++esr kar+rarert++k r++ +++
  PIN14225.1 202 vgsdreqqpSSSCSKIKRIKKVIKV-IRASVSRESRVKARERARERTSQKRRLEGQNT 258
                 5566654422222222333333333.3577888******************9987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MKTNYTNPFS ENDINCSSKL DEEEEQDPYY LMMFNFPNSP HIHLEYEDVY RQFLDLFYQN  60
QTSHHDHDHT IPPDQDPTGN VQTMISNTEN HITKQTSTTT KKRCSKKDRH SKIKTARGLR  120
DRRMRLSLDV ARKFFDLQDM LGYDKASRTV DWLLTKAMPS IRELERSRGS VCSLVGTANS  180
ASSTSVDDGN VASSPINQST TVGSDREQQP SSSCSKIKRI KKVIKVIRAS VSRESRVKAR  240
ERARERTSQK RRLEGQNTDE LRQVRSGGEV RILGGADQWI YKAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.22e-23TCP family protein