PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN14392.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 391aa    MW: 43397.9 Da    PI: 7.9586
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN14392.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.73.6e-12322367655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L++l P+     +k  + a++L +AveYIk+Lq
  PIN14392.1 322 SIAERMRRTRISEKMKKLQDLFPNM----DKQTNTADMLDLAVEYIKDLQ 367
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MFSPETVSNL NNQIAFKNVS AEGEFFKSRE FMGSDFSQNQ NQNSRLARYR SAPSSFLEAL  60
LDSAADNSSS GDECEAFFSA LMDGPNQKNS DNQMQYSTKQ EGGVEMEPRP VQNGFTNGHV  120
TGHENVVNRS YTAGVENQVH RNCSNLVRQT SSPAGFFNGF GVMGEVENYG VHNHAEASSS  180
SSGLSNHMNF SSGLSYSPKF MASIPENGNE SMGQNHQFLN GNNGANGRKH EAAFPHDSWN  240
ESPFNGLKRN RGGDPKMFSN FNGLENQNGE SRKRSTGLVS HLSLPKTSAE TAAVENFLQI  300
QQEGMVPCQM RAKRGFATHP RSIAERMRRT RISEKMKKLQ DLFPNMDKQT NTADMLDLAV  360
EYIKDLQKQV QRLTNTREKC VCSNKPKQTS P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-54bHLH family protein