PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN14465.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 357aa    MW: 37840.9 Da    PI: 8.9518
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN14465.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.3e-11289334655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri  ++ +L++l+P+     +k  s a++L +Av++I+sLq
  PIN14465.1 289 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIQSLQ 334
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MNMFPSSTSS SSQTSMEANS SGSGGGGGLM RYGSAPSSLL TTAVDSVSGA TTTRNFSAVG  60
LQTQVAPSTF FPSEASESRA KIRRTEESSK TNTSIGLQRS YGFHAAAAGG SGGASSSLVR  120
HSSSPPGFLN HLATAAGDNG FSITRGIGSS YNSKGIADNS RNISRLNSQL SFTRQKEALS  180
QISEEENIAD GVGTDNSQRK STHSYASAGF GIGSWDDNAI TFSVSPTQQA KTIGSHAVNA  240
LDNMETQFQF GIPQSALEMA TMDKLLHIPQ DSVPCKIRAK RGCATHPRSI AERERRTRIS  300
GKLKKLQDLV PNMDKQTSYA DMLDLAVQHI QSLQYEVQKL NKELDDCTCG CKKSPGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.12e-71bHLH family protein