PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN14521.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 408aa MW: 45294.9 Da PI: 6.987

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN14521.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.6e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl PIN14521.1 14 KGLWSPEEDEKLIKHITKYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	45.9	1.3e-14	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg +++eE+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w+ PIN14521.1 67 RGTFSQEEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWN 109 899*****************.*****.*******998 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLIKHIT KYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQEEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS SIKKKLRQRG 120 IDPNTHKPIS EVENNINNEE KASGNSKNTE KTSEGSSELT FAEAENSNNH ENPSNLDGRY 180 PPLLENAATN LTAAAPNSTH EFFLNRFVST HETATAGCKP SDLSGFLSFQ QINYGSPGPN 240 IGLSMNPNAN LYFNSNSKSS EINISDHFNT TNIASTLLPS SSSINLSSSN PISPFSVKFE 300 NNVSSFFEGS GAFPSWAPPD CEKSEKESTT HITEDIKWND YLHTPFLMGN SIHNPTSGQD 360 IYGETKSQGN FGAEASFSSG NWQQSLQATE TYGKHYQRLP AATFGQFS

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLIKHIT KYGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQEEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS SIKKKLRQRG  120
IDPNTHKPIS EVENNINNEE KASGNSKNTE KTSEGSSELT FAEAENSNNH ENPSNLDGRY  180
PPLLENAATN LTAAAPNSTH EFFLNRFVST HETATAGCKP SDLSGFLSFQ QINYGSPGPN  240
IGLSMNPNAN LYFNSNSKSS EINISDHFNT TNIASTLLPS SSSINLSSSN PISPFSVKFE  300
NNVSSFFEGS GAFPSWAPPD CEKSEKESTT HITEDIKWND YLHTPFLMGN SIHNPTSGQD  360
IYGETKSQGN FGAEASFSSG NWQQSLQATE TYGKHYQRLP AATFGQFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	7e-92	MYB family protein