PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN14586.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

LBD

Protein Properties

Length: 175aa MW: 19480.2 Da PI: 5.1969

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN14586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	141.2	3.3e-44	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +Ca+Ck+lrr+Cak+C++apyfpa++p kfa+vhk+FGasnv+k+l+++p ++r da+sslvyeA+arardPvyG+vg i+ lq q++ql+ +la++++ PIN14586.1 6 PCASCKLLRRRCAKECIFAPYFPADDPYKFAIVHKVFGASNVSKMLQEIPVHQRADAVSSLVYEANARARDPVYGCVGAISYLQDQVSQLQMQLAAAQA 104 7***********************************************************************************************998 PP DUF260 100 e 100 e PIN14586.1 105 E 105 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MGGNSPCASC KLLRRRCAKE CIFAPYFPAD DPYKFAIVHK VFGASNVSKM LQEIPVHQRA 60 DAVSSLVYEA NARARDPVYG CVGAISYLQD QVSQLQMQLA AAQAEILCVQ MQQQDKQQEA 120 LATSDYQLLL DDAEIEKSLF LQNNLPQLLN FTSSNSSVIY DSFKKESLYG HDMVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	4e-65	LBD family protein