PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN14588.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

LBD

Protein Properties

Length: 110aa MW: 12375.1 Da PI: 8.2039

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN14588.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	65.2	1.6e-20	6	52	1	47
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllk 47 +Ca+Ck+ rr+Ca +C++apyfpa++p+kfa+vhk+FGasn++k+l+ PIN14588.1 6 PCASCKLRRRRCAIECIFAPYFPADDPHKFAIVHKVFGASNLSKMLQ 52 7********************************************98 PP
2	DUF260	22.2	4e-07	52	82	66	96
DUF260 66 earardPvyGavgvilklqqqleqlkaelal 96 ++ra+dPvy +vg i+ lq+q++ql+ +la+ PIN14588.1 52 QVRAQDPVYRCVGAISYLQNQVSQLQMQLAV 82 68**************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 110 aa Download sequence
MGENSPCASC KLRRRRCAIE CIFAPYFPAD DPHKFAIVHK VFGASNLSKM LQVRAQDPVY 60 RCVGAISYLQ NQVSQLQMQL AVLLNFTSSN SSVNYDSFNE ESLYGRDMVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	2e-43	LBD family protein