PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN14777.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Nin-like

Protein Properties

Length: 931aa MW: 104002 Da PI: 6.9415

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN14777.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.6	5.8e-29	613	663	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yF++++kdAA+++gvc+T+LKriCRq+GI RWP+Rkik++ PIN14777.1 613 EKTISLQVLRQYFAGSLKDAARNIGVCPTTLKRICRQHGITRWPSRKIKKV 663 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 931 aa Download sequence
MEDGSFTLGN NAIDFSLMDE LLYDGFWLET THESNFWHPS PTTLTDLNST LFYFPSLDTN 60 NTATLNSNPH QDSFLKETEK SNTLGQPHLI NNPEMDEFQA QNLEAFVPSV SLSQSTNFIV 120 EDTQANRRLW VGPNRNPVRT ISVKKRLLQA INHLKDAVRD KDILIQIWVP VKRGGRQVLT 180 TNNQPFSLNP NCKNLADYRD VSRNYQFAAE EDAKEFAGLP GRVFLNKLPE WTPDVRFFKR 240 EEYPRVNHAQ RYDVRGSLAL PVFEQGSGNC LGVVEIVTTS QKVNYRPELE NICKALEAVD 300 LKSSDILRPP NVKDCNESYQ AVLMEIKNVL KCVCNTHKLP LAQIWAPCTE QGKGGCRHSD 360 ENYTHCVSTI DPACYVADQQ VSGFHEACSE HHLLKGEGIA GKAFLTNQPC FSEDITAFSK 420 TEYPLAHHAR VFNLCAAVAI RLRSTYTGTA DFVLEFFLPL HCKDGEDQRR MLDSLSSVIQ 480 RTCQSLRVVT DQELARETSA RETSLAGRLD DEKHQKSVTF PTKEPSPDPP SWIMQMTDPQ 540 NKGKGVADSL SHHHKEEPGE FKVTTQWDNS GLDFHQDSEP KLSSGGNGNF FLDGGHLPVD 600 AKTKTEKRRT KTEKTISLQV LRQYFAGSLK DAARNIGVCP TTLKRICRQH GITRWPSRKI 660 KKVGHSLRKL QLVIDSVQGA EGSIQLSSFY NNFPELVSPV VPGNSHLSMS NTSGHLQQGN 720 TQLDGTLFST ATTASKSPTS SGSHSSSTSY CCSTGVKQSS FPVNGSTTGD AVSVEQRGGM 780 MLKRARSDAE LHDLGQEETK LLVRSYSHKI FSNHASVDAP PVPQGSSKVH DVSTFRVKAA 840 FGEEKIRFSL QLQWSFQDLR QEVFRRFNID NCSRVDIKYL DDDSEWVLLT CDADLEECID 900 IHRSSKSRTI KLSLNQAFHA SLGSSFGSNG P

Sequence ? help Back to Top

Protein Sequence Length: 931 aa Download sequence

MEDGSFTLGN NAIDFSLMDE LLYDGFWLET THESNFWHPS PTTLTDLNST LFYFPSLDTN  60
NTATLNSNPH QDSFLKETEK SNTLGQPHLI NNPEMDEFQA QNLEAFVPSV SLSQSTNFIV  120
EDTQANRRLW VGPNRNPVRT ISVKKRLLQA INHLKDAVRD KDILIQIWVP VKRGGRQVLT  180
TNNQPFSLNP NCKNLADYRD VSRNYQFAAE EDAKEFAGLP GRVFLNKLPE WTPDVRFFKR  240
EEYPRVNHAQ RYDVRGSLAL PVFEQGSGNC LGVVEIVTTS QKVNYRPELE NICKALEAVD  300
LKSSDILRPP NVKDCNESYQ AVLMEIKNVL KCVCNTHKLP LAQIWAPCTE QGKGGCRHSD  360
ENYTHCVSTI DPACYVADQQ VSGFHEACSE HHLLKGEGIA GKAFLTNQPC FSEDITAFSK  420
TEYPLAHHAR VFNLCAAVAI RLRSTYTGTA DFVLEFFLPL HCKDGEDQRR MLDSLSSVIQ  480
RTCQSLRVVT DQELARETSA RETSLAGRLD DEKHQKSVTF PTKEPSPDPP SWIMQMTDPQ  540
NKGKGVADSL SHHHKEEPGE FKVTTQWDNS GLDFHQDSEP KLSSGGNGNF FLDGGHLPVD  600
AKTKTEKRRT KTEKTISLQV LRQYFAGSLK DAARNIGVCP TTLKRICRQH GITRWPSRKI  660
KKVGHSLRKL QLVIDSVQGA EGSIQLSSFY NNFPELVSPV VPGNSHLSMS NTSGHLQQGN  720
TQLDGTLFST ATTASKSPTS SGSHSSSTSY CCSTGVKQSS FPVNGSTTGD AVSVEQRGGM  780
MLKRARSDAE LHDLGQEETK LLVRSYSHKI FSNHASVDAP PVPQGSSKVH DVSTFRVKAA  840
FGEEKIRFSL QLQWSFQDLR QEVFRRFNID NCSRVDIKYL DDDSEWVLLT CDADLEECID  900
IHRSSKSRTI KLSLNQAFHA SLGSSFGSNG P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein