PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN14793.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 236aa    MW: 27091.9 Da    PI: 9.3468
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN14793.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH247.2e-082371453
                HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIks 53
                  +++E++RR+r++  +++L +llP      ++   l   +   +AveYIks
  PIN14793.1 23 ERKIIEKNRRQRMKILYSNLVSLLPDhT---SKVEgLPLPDQIDEAVEYIKS 71
                5689**********************55...56666**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MGKTRLNSAY SSKVRSGTAP RIERKIIEKN RRQRMKILYS NLVSLLPDHT SKVEGLPLPD  60
QIDEAVEYIK SFKKKLEKMK QKKESLILQR KRSQYSYGRT SQENNQATNH KRSPIVEIHE  120
MGPNFDLILA NGLQDYSKFY DIIRLLHQHG IEIAGATFSG EGTSTIQVLQ DKDGKSKLEF  180
GGAAILSRKL KELVCGTFSN EVVESQMNLW DYEIESDIWA SEIPAGFQYY CQEFYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.16e-12bHLH family protein