PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN14806.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 286aa    MW: 32481.7 Da    PI: 4.7815
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN14806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.75.7e-081171412147
                      TT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  21 ggtWktIartmgkgRtlkqcksrwqky 47 
                      g+ W++Ia +++ gRt++++k++w+++
       PIN14806.1 117 GE-WTLIAGRLP-GRTANDVKNFWNSH 141
                      45.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MGKISSQRTG TVKSGVVTTS ARKWMNNICR ELRQADYQLM IRDFCAMSML LIWEGMIKIN  60
FDGVTSPWLR GMGGQCCLWE AVMDIGKLQQ AEVEAKAALC AIRKAEDKGW ESIIFEGEWT  120
LIAGRLPGRT ANDVKNFWNS HTDKKLPTTI GETTKENAQK TTTECNIIRP RTWTFSNCQV  180
PWRRETIETT KPYTVWTSDE NPKNNQLDLS SQTDECVRWW SNLLEMAKEN MANEKHQTVH  240
CPQEILAGSF DDNEDNVATK GQGDVDGFCD FCVDIDVWEL LSFGDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.13e-11MYB family protein