PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN14884.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family BBR-BPC
Protein Properties Length: 280aa    MW: 31082.6 Da    PI: 10.1112
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN14884.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind337.14.5e-10312801301
   GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllall 85 
                 md+d+   rn+gyyep   lk +lglqlmss+aerd+k+    r++ + + ++++a+++rd          m++  rd+++++        ++k+l++ 
  PIN14884.1   1 MDEDSL--RNWGYYEPP--LKGHLGLQLMSSVAERDTKPflsgRDNPI-MVSTNGAFHPRDcvvteppvthMDY-VRDSWINH--------RDKFLHMF 85 
                 788855..9********..*********************99666666.99***********************.9******9........78999999 PP

   GAGA_bind  86 lvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad 184
                 +        +p ++   + + + +s+q++++p+++++a +             e+  ++ke    kkr+ a++pk++k kk++k ++++k++ +++   
  PIN14884.1  86 PG-------NPYNSVLAEPSGTHHSIQMVHQPDTTKEARP-----------SMEESVVKKEGGPAKKRSAAATPKTPKGKKPRK-GSTPKENGNPSV-- 163
                 93.......3555555556666677788776665555544...........334455667778888899999**********99.778878777777.. PP

   GAGA_bind 185 erskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpv 283
                 +r+k+ kk++++v+ngv++D++++P+PvCsCtG+++qCY+WG+GGWqSaCCtttiS+yPLP+stkrrgaRiagrKmSqgafkk+LekLaaeGy+++np+
  PIN14884.1 164 QRAKTAKKNVEVVINGVDMDITGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTTISMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPI 262
                 79************************************************************************************************* PP

   GAGA_bind 284 DLkdhWAkHGtnkfvtir 301
                 DL+++WAkHGtnkfv ir
  PIN14884.1 263 DLRTYWAKHGTNKFVIIR 280
                 ****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MDEDSLRNWG YYEPPLKGHL GLQLMSSVAE RDTKPFLSGR DNPIMVSTNG AFHPRDCVVT  60
EPPVTHMDYV RDSWINHRDK FLHMFPGNPY NSVLAEPSGT HHSIQMVHQP DTTKEARPSM  120
EESVVKKEGG PAKKRSAAAT PKTPKGKKPR KGSTPKENGN PSVQRAKTAK KNVEVVINGV  180
DMDITGIPIP VCSCTGTPQQ CYRWGCGGWQ SACCTTTISM YPLPMSTKRR GARIAGRKMS  240
QGAFKKVLEK LAAEGYNFAN PIDLRTYWAK HGTNKFVIIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01930.11e-100BBR-BPC family protein