PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN14921.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 258aa    MW: 28852.9 Da    PI: 7.8827
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN14921.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.73.1e-06124166855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r rr  +++ ++   L++llP++     +K++ a++Le+A +YI+ Lq
  PIN14921.1 124 RRRRQHQKLSDKTRCLQKLLPWD-----EKMDMATVLEEAYKYIRFLQ 166
                 33333346667777799999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MNEEFKFQTQ PPLLGGGEAS SAVDEAYING VCAGLNFRSL LTYGSSYPPP EIHNALKMPK  60
IEPVFTLNDG VSAEPPPYNF FSEATSSSFH HQLPNLLSLE LPQNTGPVDV ETPMLSRPRV  120
RKQRRRRQHQ KLSDKTRCLQ KLLPWDEKMD MATVLEEAYK YIRFLQAQVS VLQSMPYESS  180
AAAVSGRTTN IGGGDLDRLN RQQLLQVVLN SPVAQTQLCS NGCCLYSVEQ LVLLKKNAER  240
KALYHQLLDS SNPNSFLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.14e-19bHLH family protein