PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15012.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 703aa MW: 81029.1 Da PI: 8.1812

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15012.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.8	4.9e-20	56	143	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fY +Y+++ GF++r+ ++k + ++++++vCs+ g++++ k ++++rr+r+etr+gC+a+++v ++ dg ++vt+++ HnH+l PIN15012.1 56 FYWNYGRQNGFDIRRCHKKIK--GSLVKNAEWVCSRAGFKKPPKYVSQRKRRSRKETRCGCEARFRVAHDRyDGLYKVTDFVPFHNHPLE 143 9************987766..7889**************99*****************9999**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MEDDKQGEQS NGHNSSVGDE NDLSLDFAAL LSNSSQLDPK LVGNLVFRTP EEADWFYWNY 60 GRQNGFDIRR CHKKIKGSLV KNAEWVCSRA GFKKPPKYVS QRKRRSRKET RCGCEARFRV 120 AHDRYDGLYK VTDFVPFHNH PLETIETAHR LRCNRHLRPS EKNLLSGMTS AGISPSKAMD 180 YLEYIEGGPG KVAFRRKDVY NYLNKQRMQM IKDGDVNTAL SLLDGMKLHD KGMIFEYTVD 240 EEQTLTRLFW TDGLSRAEFD LFGDVLMFDS TYKTNTYCFP LVIMCGVNNH FSTCVFGAAL 300 LYNETIESYQ WLLQKFRDAM GGKMPISVLT DQDAAMHAAI EIEFPFARHR ICSWHLERNA 360 MQNTHMSVFA CDMGLLLKKN YSIEEFDSSW LSITERHGLT EFLKQYHICI QKIRATFFQN 420 QEDCENSTPS LLNDSLRTFE KHAVSVYTKK VFELVSKEIR KEQDMVLEEA TNDDSYMFTF 480 KFGSYPKVGD KRFSVKIDWA GQNFQCDCEK LESVGIPCRH LISAFKVLRL EEIPKKCIEE 540 RWTIAIGKKL VDKFSTSFPF EDEQRRRFAI LNRECASLCL QSSQSDPATF KSVKCIRDLA 600 QELENENLMN AIDRDGAHEN QKLPIVKDPK RIRSSKNVHD PKKIRSRGVP KAKQQNCGKC 660 GEPGHKANTC TRNSRKLDGR HVCSVNFEES NEASNMTNPN CSY

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MEDDKQGEQS NGHNSSVGDE NDLSLDFAAL LSNSSQLDPK LVGNLVFRTP EEADWFYWNY  60
GRQNGFDIRR CHKKIKGSLV KNAEWVCSRA GFKKPPKYVS QRKRRSRKET RCGCEARFRV  120
AHDRYDGLYK VTDFVPFHNH PLETIETAHR LRCNRHLRPS EKNLLSGMTS AGISPSKAMD  180
YLEYIEGGPG KVAFRRKDVY NYLNKQRMQM IKDGDVNTAL SLLDGMKLHD KGMIFEYTVD  240
EEQTLTRLFW TDGLSRAEFD LFGDVLMFDS TYKTNTYCFP LVIMCGVNNH FSTCVFGAAL  300
LYNETIESYQ WLLQKFRDAM GGKMPISVLT DQDAAMHAAI EIEFPFARHR ICSWHLERNA  360
MQNTHMSVFA CDMGLLLKKN YSIEEFDSSW LSITERHGLT EFLKQYHICI QKIRATFFQN  420
QEDCENSTPS LLNDSLRTFE KHAVSVYTKK VFELVSKEIR KEQDMVLEEA TNDDSYMFTF  480
KFGSYPKVGD KRFSVKIDWA GQNFQCDCEK LESVGIPCRH LISAFKVLRL EEIPKKCIEE  540
RWTIAIGKKL VDKFSTSFPF EDEQRRRFAI LNRECASLCL QSSQSDPATF KSVKCIRDLA  600
QELENENLMN AIDRDGAHEN QKLPIVKDPK RIRSSKNVHD PKKIRSRGVP KAKQQNCGKC  660
GEPGHKANTC TRNSRKLDGR HVCSVNFEES NEASNMTNPN CSY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	108	KKPPKYVSQRKRRSRK
2	101	106	QRKRRS
3	102	109	RKRRSRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-65	FAR1 family protein