PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15052.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HD-ZIP
Protein Properties Length: 827aa    MW: 90698.5 Da    PI: 6.5479
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15052.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.83.7e-182582457
                -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  PIN15052.1 25 YVRYTAEQVEALERVYSECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 82
                5789****************************************************97 PP
2START158.26.6e-501643712204
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e+++ka+ ++  Wv+++ +++g+ ++ +f+ ++++sg a+ra+g+v  +++   +e+l+d++ W +++++ e+      g  g+++l +++ 
  PIN15052.1 164 IAEETLAEFLSKATGTAVDWVQMPGMKPGPGSVGIFAIAQSCSGVAARACGLVSLEPT-KIAEILKDRPSWFRDCRSLEVFTMFPAGngGTIELLYTQA 261
                 7899******************************************************.7777777777***********999999999********** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l+p Rdf+++Ry+ +l+  ++v++++S++ +   p+    s++vRae+lpSg+li+p+++g+s +++v+h +l++++++++lr+l++s+ + ++
  PIN15052.1 262 YAPTTLAPaRDFWTLRYTTTLENSSLVVCERSLSGTGAGPNaaaASQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQ 360
                 **************************************9999999****************************************************** PP

                 HHHHHHTXXXX CS
       START 194 ktwvatlqrqc 204
                 kt+ a+l++ +
  PIN15052.1 361 KTTIAALKYIR 371
                 *******9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 827 aa     Download sequence    
MAMVAQHHRE GSSGSISKHL DAGKYVRYTA EQVEALERVY SECPKPSSLR RQQLIRECPI  60
LSNIEPKQIK VWFQNRRCRE KQRKESTRLQ SVNRKLTAMN KLLMEENDRL QKQVSQLVCE  120
NGYMRQQLRT APPTADASCE SAVTTPQQSL RDANANNPAG LLSIAEETLA EFLSKATGTA  180
VDWVQMPGMK PGPGSVGIFA IAQSCSGVAA RACGLVSLEP TKIAEILKDR PSWFRDCRSL  240
EVFTMFPAGN GGTIELLYTQ AYAPTTLAPA RDFWTLRYTT TLENSSLVVC ERSLSGTGAG  300
PNAAAASQFV RAEMLPSGYL IRPCEGGGSI IHIVDHLNLE AWSVPEVLRP LYESSKVVAQ  360
KTTIAALKYI RQIAQETSGE VVYSLGRQPA VLRTFSQRLS RGFNDAVNGF NDEGWSILSC  420
DGAEDVIVAI NSAKNPISGS NTLSMLGGIL CAKASMLLQN VPPAVLVRFL REHRSEWADF  480
NVDAYAAASL KNTYAYPGMR PTRFTGSQTI MPLGHTIEHE EMLEIIRLEG HSLSHEDAFM  540
SRDIHLLQMC SGIDENAVGA CSELVFAPID EMFPDDAQLL PSGFRIIPLD SKPDSHETLD  600
LTSSLESNNG KNAAASCSAR AILTIAFQFP FESNLRDNVA TMARQYVRSV ISSVQRVAMA  660
ISPSGLSPTV GSKLSPASPE ALTLAHWICQ SYSYHAGVDL LRADSTSGES LLKTLWHHQD  720
AILCCSLKAV PVFTFANQAG LDMLETTLVA LQDITLDKIF DDTGRKALFS EFAKIMQQGF  780
THMPGGICLS TMGRHVSYEQ AIVWKVFAAE ENTVHCLAFS FINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein