PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15190.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family SBP
Protein Properties Length: 220aa    MW: 24256.1 Da    PI: 9.7406
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15190.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP135.22e-4290165277
                 -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                 Cq+e+C+adls+ak+yhrrhkvCe+h+ka++v+v+g++qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk+ 
  PIN15190.1  90 CQAEKCTADLSDAKTYHRRHKVCEHHAKAQAVVVAGIRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKNP 165
                 **************************************************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MSLSIFPLKI PSPHHPTSLP HLNPTIYIPL LQPQAYNPMN EKIMKKDSVT ESEDDGGAVE  60
DDKRKRVVGS SGTATKKGSS GGGGSSMKSC QAEKCTADLS DAKTYHRRHK VCEHHAKAQA  120
VVVAGIRQRF CQQCSRFHEL SEFDEAKRSC RRRLAGHNER RRKNPADNSQ AEGSTSGRIR  180
SSSSGGSGQL NDVVCGQVED RGRIQISVQE NANYQQFHVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.18e-41SBP family protein