PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15218.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HD-ZIP
Protein Properties Length: 219aa    MW: 25458.3 Da    PI: 4.643
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15218.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.5e-181467356
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                k+++++++q++ Le+ Fe ++++  e++ +LAk+l+L+ rqV +WFqNrRa++k
  PIN15218.1 14 KKRRLNPNQVQFLEKSFEVENKLEPERKVQLAKELNLQPRQVAIWFQNRRARYK 67
                45689************************************************9 PP
2HD-ZIP_I/II122.32.5e-3913104192
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  +kkrrl+ +qv++LE+sFe e+kLeperKv+la+eL+lqprqva+WFqnrRAR+ktk lEk+y++Lk++yd+lk++ ++L ke+e++++e++
   PIN15218.1  13 QKKRRLNPNQVQFLEKSFEVENKLEPERKVQLAKELNLQPRQVAIWFQNRRARYKTKLLEKEYDSLKANYDKLKADYDNLFKENEKMKTEVN 104
                  69*************************************************************************************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MENCNEDFDG NFQKKRRLNP NQVQFLEKSF EVENKLEPER KVQLAKELNL QPRQVAIWFQ  60
NRRARYKTKL LEKEYDSLKA NYDKLKADYD NLFKENEKMK TEVNLLTEKL LKKEPRDPIS  120
PLDSEPKKDA ASSAKSDVFD SDSPHCTDGN HSAVLEPTAD SSHVFESDFS QEEDDSLSRS  180
LLPPSCFPKL EVESYDDLQP NSCNLGFPVQ DQGTWLWQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.17e-42HD-ZIP family protein