PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15227.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 256aa    MW: 28199.2 Da    PI: 7.1471
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15227.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.4e-10141188455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  PIN15227.1 141 SHSLAERARREKISERMKMLQDLVPGC----NKVIGKALVLDEIINYIQSLQ 188
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MDPQGAAMMN DGGVYNFAEI WPGFQMNTAA TSYGLDLDPM LMDHKSNHSP PNHNSRKRRD  60
EDECAKGGAS TSNSNGNSSN NNVMNEGDSK RLKAVGSNEN RENKAEREGN SGKAAEPPAK  120
PAEPPKDYIH VRARRGQATD SHSLAERARR EKISERMKML QDLVPGCNKV IGKALVLDEI  180
INYIQSLQRQ VEFLSMKLEA VNARADIGGY PSKDFAQTTF DASNMAFGTQ STREYGRGSS  240
PEWLHMQIGS GFERTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.15e-82bHLH family protein