PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15238.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 85aa    MW: 9712.69 Da    PI: 10.2205
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15238.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.63.3e-091558344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+   +++ +a +++  +   +W+ Iar +  g+++++++ ++
       PIN15238.1 15 SWTPKQNKQFEEALARFDRDtpdRWHNIARSVS-GKSAEEVRRHY 58
                     7*****************99*************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    
MASSSMSSSR GSSSSWTPKQ NKQFEEALAR FDRDTPDRWH NIARSVSGKS AEEVRRHYEA  60
LVTDIKRIET DQVPIPNYGT ISNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.19e-30MYB_related family protein