PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15244.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 89aa    MW: 10174.3 Da    PI: 7.6667
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15244.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.49.1e-10652347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                      WT+   + + da + + ++    W   ar +g g+t +++ks++qk+
       PIN15244.1  6 TWTAKQNKAFEDALATYDKDkpdWWQNLARAVG-GKTVEEVKSHYQKL 52
                     7*********************9**********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MSSNSTWTAK QNKAFEDALA TYDKDKPDWW QNLARAVGGK TVEEVKSHYQ KLVEDINHIE  60
SGKVPVPNYK SYGDTANDQG QRLQYLKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.12e-34MYB_related family protein