PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15287.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 227aa    MW: 25832.5 Da    PI: 9.7584
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3491.1e-15128217198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 f+k +++s+v+   +l lp +f++ h ++ ++++ + l de+g ++  k+   k++    l++GW++F+ +++L +gD ++F+l++ ++f  +v ++r
  PIN15287.1 128 FVKPMLQSHVTGGFWLGLPVQFCKIH-LP-NRDVIVNLIDEQGDEFPTKYLALKTG----LSGGWRGFAIDHELVDGDALIFQLTEPTTF--KVYIIR 217
                 89*********************666.44.58899***************666666....***********************9765555..888887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MVVAKQSEYE ASRQKRLEEN KKRMEELNLN KLAQALRSPK PSPMKKVKTK VPKQPLDLSA  60
VRRSSRVADL PARSYKEVPI EPMGRPRSYG YKRRDLSNRV YASDEDREYA IQRAEDLQSG  120
LDQDIPSFVK PMLQSHVTGG FWLGLPVQFC KIHLPNRDVI VNLIDEQGDE FPTKYLALKT  180
GLSGGWRGFA IDHELVDGDA LIFQLTEPTT FKVYIIRVNE NGDGSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-87B3 family protein