PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15555.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB_related

Protein Properties

Length: 450aa MW: 50430.4 Da PI: 9.9091

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.7	2.4e-07	129	171	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eE ++l d+++++ + + Ia +++ +t +++k+r+++ PIN15555.1 129 AWTKEETDQLFDLCERFDLR-FIVIADRLPSSKTVEELKDRYYS 171 7*****************.*****999*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MDAKDILGLP KHALPIQEKK SKPPKESQRK PEGISREVYA LTGGLAPLMP AIDVNQLKRK 60 AQAQNEKITW QWLPFTNSAR KDSLQLYHWV RVVNGIPPTG DYSFAKYNKS VDVIKYTDEE 120 YEKYLTDPAW TKEETDQLFD LCERFDLRFI VIADRLPSSK TVEELKDRYY SVSRTILSAR 180 AASPGEVANH PIVKEPYNAS QETERKRALS LLLSHTKQQE RKDVEVLAQA KRITEARKTI 240 KASQQPEVPV ISDVEALGVD KDIISAETVP PSTSSQFPST ITSPVSETAS VMASLRMLRV 300 YLRTYALEQM VQAASSSAGL RTIKRVEQTL QDLGVNLKPK VPTKAVCAEH LELRKEILTL 360 LNLQKQLQNK EAEGSSFRDG SYTETPGTPP KQQALRAADL DRTFTPDSIS IGGERFGKRE 420 QKRKGGPGRL SEAPSSPAQS KRPRKYKASD

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MDAKDILGLP KHALPIQEKK SKPPKESQRK PEGISREVYA LTGGLAPLMP AIDVNQLKRK  60
AQAQNEKITW QWLPFTNSAR KDSLQLYHWV RVVNGIPPTG DYSFAKYNKS VDVIKYTDEE  120
YEKYLTDPAW TKEETDQLFD LCERFDLRFI VIADRLPSSK TVEELKDRYY SVSRTILSAR  180
AASPGEVANH PIVKEPYNAS QETERKRALS LLLSHTKQQE RKDVEVLAQA KRITEARKTI  240
KASQQPEVPV ISDVEALGVD KDIISAETVP PSTSSQFPST ITSPVSETAS VMASLRMLRV  300
YLRTYALEQM VQAASSSAGL RTIKRVEQTL QDLGVNLKPK VPTKAVCAEH LELRKEILTL  360
LNLQKQLQNK EAEGSSFRDG SYTETPGTPP KQQALRAADL DRTFTPDSIS IGGERFGKRE  420
QKRKGGPGRL SEAPSSPAQS KRPRKYKASD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	0.0	MYB_related family protein