PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15569.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 190aa    MW: 21671.7 Da    PI: 8.3234
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15569.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.16.7e-053658123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ykC+ C++ F++   L  H+++H
  PIN15569.1 36 YKCSFCKREFRSAQALGGHMNVH 58
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MKGFYKVKDS WDFASYYNTD QDLVAAGGFI WPPRCYKCSF CKREFRSAQA LGGHMNVHRR  60
DRAARLRHES PPRDICNNQS NFLNLNVCPN PSFNQNPSSF LPISSEFPHF TSKLPQILPS  120
SATEMATTID LVKIKDAKGL SRVEKCNEFV NEKVCENNTK KRGFVKLDLE IGLINECKEE  180
LDLELRLGCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.12e-32C2H2 family protein