PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15588.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family G2-like
Protein Properties Length: 247aa    MW: 27832.4 Da    PI: 7.9403
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15588.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.42.5e-31175228255
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 +r+rWt++LHe+F++ v++LGG++kAtPk+il+lm+ +gLt+ hvkSHLQkYR+
  PIN15588.1 175 KRIRWTQDLHEKFIDSVNRLGGAKKATPKAILKLMNCHGLTIFHVKSHLQKYRV 228
                 79***************************************************7 PP
2Myb_DNA-binding47.54.1e-15178227348
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      rWT++++e+++d v++lGg    t+k+I + m+  g+t  ++ks++qky+
       PIN15588.1 178 RWTQDLHEKFIDSVNRLGGAkkaTPKAILKLMNcHGLTIFHVKSHLQKYR 227
                      9*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MNNIMQKFGS FSTSNFEMQS FKSESLLKSC NDPQLLEISE GDRTTQSDNL SGCGQLNYSA  60
SSCSQMLNSN GLAFLEIADD SFQSKDTLQS IVQSCCCGLM SHNKSISSSS DSIQECKHHK  120
FQENKSVSES LRSLSHDSLL CFEKVINVEN HKCSKSQQEK QHSVSIEKEA MKKQKRIRWT  180
QDLHEKFIDS VNRLGGAKKA TPKAILKLMN CHGLTIFHVK SHLQKYRVGH LIPETMEENS  240
EKLDSKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.24e-30G2-like family protein