PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15629.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WOX

Protein Properties

Length: 383aa MW: 42082 Da PI: 7.001

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.8	7.6e-18	57	117	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ PIN15629.1 57 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 117 89***************99***********************************995 PP
2	Wus_type_Homeobox	112.5	2.2e-36	56	119	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++kq PIN15629.1 56 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKQ 119 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MASSNRHWPS MFKSKPSNSS HHQSQHHDIN SSHISSGFHR SPYAPVSACE ERTPEPKPRW 60 NPKPEQIRIL EAIFNSGMVN PPRDEIRKIR AQLQEYGQVG DANVFYWFQN RKSRSKHKQR 120 QLQNNKLSQL PPTTTPPPIT ATAPAASSSS SSDKSSPNNS KEKALSVSSS TVIDLLNSPS 180 ASVNQPFFQP PTEFVTEAFF FPMQQSSAGS SSTGAGLTQG LCFPDIIADQ SVGNCPSSLL 240 GELMLMNHDR SKKVEDDDQK MKLHELELSY AVTPAPNAAD PIVHPSLSVP LPTNQINLQG 300 EGLGEQRPQK STVFINDVCF EVAVGPFNVK EAFGDDAVLV HSSGQPVLTN EWGVTLQPLQ 360 HGAFYYLIRA FSPSPSDRTI DLI

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MASSNRHWPS MFKSKPSNSS HHQSQHHDIN SSHISSGFHR SPYAPVSACE ERTPEPKPRW  60
NPKPEQIRIL EAIFNSGMVN PPRDEIRKIR AQLQEYGQVG DANVFYWFQN RKSRSKHKQR  120
QLQNNKLSQL PPTTTPPPIT ATAPAASSSS SSDKSSPNNS KEKALSVSSS TVIDLLNSPS  180
ASVNQPFFQP PTEFVTEAFF FPMQQSSAGS SSTGAGLTQG LCFPDIIADQ SVGNCPSSLL  240
GELMLMNHDR SKKVEDDDQK MKLHELELSY AVTPAPNAAD PIVHPSLSVP LPTNQINLQG  300
EGLGEQRPQK STVFINDVCF EVAVGPFNVK EAFGDDAVLV HSSGQPVLTN EWGVTLQPLQ  360
HGAFYYLIRA FSPSPSDRTI DLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	3e-52	WOX family protein