PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15687.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 878aa MW: 99050.7 Da PI: 6.6927

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15687.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.1	1.1e-16	60	134	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY++YA++vGFs+ + + ++++ +g i++ +f Cs+e +++++ ++ C+a+l++++++ + w+vtk++++HnH+ PIN15687.1 60 DFYDAYARRVGFSTHVGQYSRTNPDGPIVSWEFACSREVFKRKNVES--------------CNAMLRIERKDPDSWVVTKFVEDHNHST 134 6**************************************999877..............************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 878 aa Download sequence
MDYEVVEVDM EKRQRNGDAH TQHGEDGAQS LSESSTNQAD DGNKKPYLGM EFESQESAKD 60 FYDAYARRVG FSTHVGQYSR TNPDGPIVSW EFACSREVFK RKNVESCNAM LRIERKDPDS 120 WVVTKFVEDH NHSTVSPSKV HFLRPRRHFA GAAKSVPLET ADNQNDIMVS VDGNHVIYDP 180 NLVMSNTSPV ETNPVVRNKS PAETNPAVRS ASSTETNRAS VSAVPVMPLH FIQPSSRRRT 240 LGRDAHNLLT YFRKMQAENP AFYYAIQLDD DNRLSNVFWA DARSRIAYSH FGDAVTFDTM 300 YRPNQFQVPF APFTGVNNHG QMILFGCALL LDESEASFAW VFKTWLSAMN NRPPVSITTD 360 QDRAIKAAVH QVFPETRHCI CKWHILREGQ ERLAHIYLAH PSFYGELYSC INFSETIEEF 420 ESSWSSILEK YDIWKNEWLQ AVYNARKQWA PVYFRDTFFA ALSSNHGVSS FFDGYVNQQT 480 TIPMFFKQYE RALENSLERE IEADYYTICV TPVPKTPSPM EQQAANLYTK KVFEKFQEEL 540 VETFVHTANK IDGDGTISKF RVAKYEHDHK AYIVTLDVSE MNASCSCKMF EYSGVLCRHI 600 LTVFTVTNVL TVPSHYILKR WTRNARAGLS DEEDTGVRSM EALTVRFNNL CREALKFAEE 660 GAIATETYGA AIDVLREGAR KIALVKKTVA KVKPPTSQGS GSFQDIGSRK SSVPPPDMIP 720 SLWPWQDAVP NLFNLNDAGA PVADLSQPTM APIAINRDGA LADNTVVLTC FKSMTWVIEN 780 KNAASKVALI NLKLQDYGKA PSGETEVQFR LTRASLEPML KSMTYISQQL STPANKVAVI 840 NLKLQDATTA GQAEVKFQVS KDTLGSMLRS MAYIREQL

Sequence ? help Back to Top

Protein Sequence Length: 878 aa Download sequence

MDYEVVEVDM EKRQRNGDAH TQHGEDGAQS LSESSTNQAD DGNKKPYLGM EFESQESAKD  60
FYDAYARRVG FSTHVGQYSR TNPDGPIVSW EFACSREVFK RKNVESCNAM LRIERKDPDS  120
WVVTKFVEDH NHSTVSPSKV HFLRPRRHFA GAAKSVPLET ADNQNDIMVS VDGNHVIYDP  180
NLVMSNTSPV ETNPVVRNKS PAETNPAVRS ASSTETNRAS VSAVPVMPLH FIQPSSRRRT  240
LGRDAHNLLT YFRKMQAENP AFYYAIQLDD DNRLSNVFWA DARSRIAYSH FGDAVTFDTM  300
YRPNQFQVPF APFTGVNNHG QMILFGCALL LDESEASFAW VFKTWLSAMN NRPPVSITTD  360
QDRAIKAAVH QVFPETRHCI CKWHILREGQ ERLAHIYLAH PSFYGELYSC INFSETIEEF  420
ESSWSSILEK YDIWKNEWLQ AVYNARKQWA PVYFRDTFFA ALSSNHGVSS FFDGYVNQQT  480
TIPMFFKQYE RALENSLERE IEADYYTICV TPVPKTPSPM EQQAANLYTK KVFEKFQEEL  540
VETFVHTANK IDGDGTISKF RVAKYEHDHK AYIVTLDVSE MNASCSCKMF EYSGVLCRHI  600
LTVFTVTNVL TVPSHYILKR WTRNARAGLS DEEDTGVRSM EALTVRFNNL CREALKFAEE  660
GAIATETYGA AIDVLREGAR KIALVKKTVA KVKPPTSQGS GSFQDIGSRK SSVPPPDMIP  720
SLWPWQDAVP NLFNLNDAGA PVADLSQPTM APIAINRDGA LADNTVVLTC FKSMTWVIEN  780
KNAASKVALI NLKLQDYGKA PSGETEVQFR LTRASLEPML KSMTYISQQL STPANKVAVI  840
NLKLQDATTA GQAEVKFQVS KDTLGSMLRS MAYIREQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein