PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15729.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HD-ZIP

Protein Properties

Length: 194aa MW: 21330.1 Da PI: 7.2142

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	50.7	3e-16	14	66	5	57
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++++q++ Le+ F +++ e++ +LA++lg++ rq+ +W+qN+R ++k+ PIN15729.1 14 KRLSQDQVRLLETSFDAGKKLEPERKFQLARELGVPPRQIAIWYQNKRSRWKN 66 5689***********************************************95 PP
2	HD-ZIP_I/II	106.1	2.7e-34	12	103	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rls++qv+lLE+sF++ +kLeperK +lareLg+ prq+a+W+qn+R R+k++ lE d+ aL+ +++a +e+e+Lekeve+Lr elk+ PIN15729.1 12 QKKRLSQDQVRLLETSFDAGKKLEPERKFQLARELGVPPRQIAIWYQNKRSRWKNQSLELDHGALQVRLEAALSEKEQLEKEVESLRGELKR 103 69*************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MNLSPNPKPI IQKKRLSQDQ VRLLETSFDA GKKLEPERKF QLARELGVPP RQIAIWYQNK 60 RSRWKNQSLE LDHGALQVRL EAALSEKEQL EKEVESLRGE LKRAQDMLLG FRQAQAQAHQ 120 AACAAAPPVS SLSSCCDEGA GSSSLNDEVG CSANWANGGG LQFEELYACF MLGAARGSNC 180 GSIPGGANER DFWV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53980.1	5e-37	HD-ZIP family protein