PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15739.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family SBP
Protein Properties Length: 138aa    MW: 15509.4 Da    PI: 10.465
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15739.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP133.28.6e-4225101177
                 --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
         SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                 +C ve+C adls +k+yh+rh+vCevh+kapv+lv+gl+qrfCqqCsrfhelsefD++krsCrrrLa+hnerrrk++
  PIN15739.1  25 CCLVENCGADLSGCKKYHQRHRVCEVHAKAPVALVEGLRQRFCQQCSRFHELSEFDQTKRSCRRRLAGHNERRRKSS 101
                 6**************************************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MSLGEGSGKR NGRGGGGGGV APPPCCLVEN CGADLSGCKK YHQRHRVCEV HAKAPVALVE  60
GLRQRFCQQC SRFHELSEFD QTKRSCRRRL AGHNERRRKS SLESQKDGSS RRLKENQFRH  120
LREGNEIGSR GNQNYHIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15270.13e-39SBP family protein