PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15819.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Trihelix
Protein Properties Length: 248aa    MW: 28139.3 Da    PI: 5.1574
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15819.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix77.52e-2440134186
    trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rWt+qe+ +Lie+++  eer rrg+         + +p+W++vs+++r+ g++r+p+qC+++w+nl  ++kkik +e++ ++e +s + + ++l+
  PIN15819.1  40 RWTRQETVVLIEGKKIAEERGRRGRrpstvfgsdQPEPKWDSVSSFCRRNGVNRGPVQCRKRWSNLVSDFKKIKLWESQDRPEGESFWMMRSDLR 134
                 8*********************986667777777**********************************************999999999888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MASGTNGSPE NAKSPVDVTD GQQPSPERTE DRNKTPRHPR WTRQETVVLI EGKKIAEERG  60
RRGRRPSTVF GSDQPEPKWD SVSSFCRRNG VNRGPVQCRK RWSNLVSDFK KIKLWESQDR  120
PEGESFWMMR SDLRRERRLP GFFDREVYDV LDGKAFAASE NQLALVVINA DGNNGERIDD  180
AEADDEDEMT EDDEPLKAFS EFEQVAPEEI GKEKVMTDGK AKSIPSPVPI SGTLKHSTVK  240
ILQSYIFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.15e-61Trihelix family protein