PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15857.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ARF
Protein Properties Length: 469aa    MW: 52297.4 Da    PI: 8.6012
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15857.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B378.28.6e-25114216199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f kvltpsd++k g +++p+ +ae +        +++ +   l+l+d+ ++ We+++iyr++++r++lt+GW++Fv+a++L +gD+vvF+ ++rs+ el
  PIN15857.1 114 FAKVLTPSDANKGGGFSVPRFCAELIlpeldftAEPPVQ--NLILKDTFNNAWEFRHIYRGTPRRHLLTTGWSKFVNAKHLVAGDSVVFM-KKRSTNEL 209
                 89*****************9888777****997666666..6************************************************.5569999* PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++v+r+
  PIN15857.1 210 FIGVRRA 216
                 *****97 PP
2Auxin_resp83.35.3e-28230310183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+++a+ +++FevvY+Pr + ++Fvvk+ekve+al++++svGmR++ma+et++ +++++ +Gtv+  +      W +S+Wr+L+
  PIN15857.1 230 AIQNAERGMPFEVVYYPRFGLPDFVVKAEKVEEALRMHWSVGMRVRMAVETDELPRKTWfQGTVAVAHG---GPWFGSPWRMLQ 310
                 5678999****************************************************99**998887...56********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    
MAGPSSSAAP IPAAELDVSV WRAIAGASVQ IPSLNSYVYH FPQGHLEHFS SSAFLQNSSF  60
TLRRPMILCQ VLSVRFLCNL NDQVFVRLIL QPLEQRHMDN RNQDDNNQND VVSFAKVLTP  120
SDANKGGGFS VPRFCAELIL PELDFTAEPP VQNLILKDTF NNAWEFRHIY RGTPRRHLLT  180
TGWSKFVNAK HLVAGDSVVF MKKRSTNELF IGVRRASRFG GYDGQDVGEA IQNAERGMPF  240
EVVYYPRFGL PDFVVKAEKV EEALRMHWSV GMRVRMAVET DELPRKTWFQ GTVAVAHGGP  300
WFGSPWRMLQ VTWDEPESLL NVNRVSPWQV EYVRPTPLLD SIVPAPKRSR LLQNPTMLPT  360
AEHLNMGVFN NAPLSADMQG ARRGHILTPG TSTANNELRT MGIERDQRTT VSTVLSVGSP  420
YPDNLSASSS SVHFCGTDLR LSQPGYSSST KVGSSSFQLF GKVIQMSES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77850.11e-114ARF family protein