PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15866.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 236aa    MW: 25192.1 Da    PI: 7.2605
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15866.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.58.6e-07201226530
                 HHHHHHHHHHHHHHHHHHHHCTSCCC CS
         HLH   5 hnerErrRRdriNsafeeLrellPka 30 
                 h+++Er RR+ri +++  L+el+P+a
  PIN15866.1 201 HSIAERLRRERIAERMKALQELVPNA 226
                 99**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MNNINPLLNQ PQFQEMQVPQ ILASSHFDPA ASHDDFLEQM LSSVPSSSAT FPWADDQAPQ  60
LEEQSAAVLA SKLRQNQISN GAAKALMFQQ QLLLSRAVAA TNGMPLGDHN DVVDGNPFKS  120
PNPANDASVK ALFNGFTGSL GQTSNLSQHF HHPQSQNFGT AGAAPTPATD QPAASGSSGG  180
GAGAQPKQRV RARRGQATDP HSIAERLRRE RIAERMKALQ ELVPNANKVF SLLPLT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1206211RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.17e-11bHLH family protein