PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15895.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 296aa    MW: 31064.3 Da    PI: 6.8889
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-08145189554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L++l+P+ +      K + a +L +  +Y+k L
  PIN15895.1 145 HSIAERLRRERIAERIRALQDLVPSvN------KTDRAVMLDEILDYVKFL 189
                 99***********************55......9**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MANNPGEAPS GDFFDQILGF TGYAAGAEGN LVGNEVAPAA MMLHLGSGDG SPQLGGLGGI  60
GVGIGGGYGV GSGGSIFPLG LSLEQGREGF NDTMGRGNRF CRDDAVASRA SSIRAPIGNT  120
VPAVHHPPAV RPRVRARRGQ ATDPHSIAER LRRERIAERI RALQDLVPSV NKTDRAVMLD  180
EILDYVKFLK LQVKVLSMSR MGGAEPVAPL VTDMPLSSVQ EEGHVGEAAQ PAWAKLSNDG  240
TERHVAKLME ENVGAAMQLL QSKALCIMPI SLASAIYHTQ APDTTTLMKP ASNPPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150155RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.29e-77bHLH family protein