PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15905.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 349aa MW: 39124.3 Da PI: 8.4407

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.6	4.5e-13	203	249	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq PIN15905.1 203 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITDLQ 249 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MFYLTSMYFA FPFDKPSVPS QSFNSGRTIW DSDVKSCLER YESRSYLAKL ARLETVVFVP 60 TKSGVVEIGS RKSIPEDRNI IQTAKSIVVK LNLTQTKAVP KIFGQELSVG GSRSGPISIS 120 FSPKVEDDSG FSSESYDMQS TQAYGNSSNG PRIEDSETKL FPHSQAMVSN MEQAREDPFL 180 LSDERKPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPNIS KMDKASLLGD 240 AIAYITDLQT KIRILEAEKG IVNTKQNQCS LPDMDFHERH EDVVLRVSCP LDSHPVSRVI 300 LALREHQVAA QESTISIREN GEVVHTFSIQ TQSGAAEDLK DKLSAALLK

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MFYLTSMYFA FPFDKPSVPS QSFNSGRTIW DSDVKSCLER YESRSYLAKL ARLETVVFVP  60
TKSGVVEIGS RKSIPEDRNI IQTAKSIVVK LNLTQTKAVP KIFGQELSVG GSRSGPISIS  120
FSPKVEDDSG FSSESYDMQS TQAYGNSSNG PRIEDSETKL FPHSQAMVSN MEQAREDPFL  180
LSDERKPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPNIS KMDKASLLGD  240
AIAYITDLQT KIRILEAEKG IVNTKQNQCS LPDMDFHERH EDVVLRVSCP LDSHPVSRVI  300
LALREHQVAA QESTISIREN GEVVHTFSIQ TQSGAAEDLK DKLSAALLK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	185	193	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-121	bHLH family protein