PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15913.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 343aa    MW: 38494.5 Da    PI: 10.1411
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15913.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.35.7e-32276333359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ edp+++++tYegeHnh+
  PIN15913.1 276 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDPSMLIVTYEGEHNHP 333
                 9************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MEEVEKANIA AIESCHRVIS ILSQPQDQNQ CRNLVEQTGE AFHKFKKVVS LLNSSCGHAR  60
VRKARNIQTP FPQSIFLENS TLRADDHHHK PLNLLQINPV DSTSHQEIGS IVKNALTLGN  120
PSLELSSHGK NLHLPRQTPL PNYHFLPQQR FQLQQQQLKQ QAELMYRRSN SGISLNFDSS  180
TYTPTMSSTR SFISSLSIDG SVANLEGSSF HLIGAARSAD QSSFHHKRRC SGRGEDGSVK  240
CGSSGRCHCS KKRKHRVKRS IKVPAISNKL ADIPPDEYSW RKYGQKPIKG SPHPRGYYKC  300
SSMRGCPARK HVERCLEDPS MLIVTYEGEH NHPRMPSQSA NTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-115WRKY family protein