PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15933.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB_related

Protein Properties

Length: 563aa MW: 59779.6 Da PI: 8.5675

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.3	1.1e-10	204	233	1	30
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30 r +W+teEd +l av+++G ++W+tIar+ PIN15933.1 204 RRAWSTEEDVKLTAAVQKYGDRNWATIARE 233 679*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MVDKSKKRKK GSISEADAST LLQRYSVHTV LALLQEVAQV PGENIDWQEM VKNTATGISS 60 AREYQMLWRH LAYGQTLIDQ FDHDANPMDD DSDLEYELEA FPAVGREASA EAAACVKVLI 120 ASGYPNDSHI PNNSTIEAPL TINIPNCKAA AASSDSSLLA NVMQGTNICI PVSVQKQPLP 180 SGVCGEKRPN NGASGVNLVP RRKRRAWSTE EDVKLTAAVQ KYGDRNWATI AREDFGDDRK 240 ASELSQRWTQ LRKKQGNSNV GTSSQLSETQ LAARRAVSLA LNMPMGDNLK ATGQISTAAV 300 GIKSQHQSQK ASAPPPDQQL GRVVPPKPQA PTKWPPMNPT STPDSLVKAA AVAAGARIAT 360 SADASSLIEA ARSQNVVHIT TGGSSMMKSS TASISNQLPS NVHFIRNGLA KAPISTFSSA 420 KPTISRPGEA QQAQAHSTKP ATAAVRPNPV ENSATSIRST ELSKTTQHAV ASTSNQTKEI 480 VQSDQGANPA AERVPQDQSA ALGNQSEVGK HCSPVSGNAL KENSREDQAS TQAKDDRGIL 540 SLSEVEDDGK KSTDNLCASK GNS

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MVDKSKKRKK GSISEADAST LLQRYSVHTV LALLQEVAQV PGENIDWQEM VKNTATGISS  60
AREYQMLWRH LAYGQTLIDQ FDHDANPMDD DSDLEYELEA FPAVGREASA EAAACVKVLI  120
ASGYPNDSHI PNNSTIEAPL TINIPNCKAA AASSDSSLLA NVMQGTNICI PVSVQKQPLP  180
SGVCGEKRPN NGASGVNLVP RRKRRAWSTE EDVKLTAAVQ KYGDRNWATI AREDFGDDRK  240
ASELSQRWTQ LRKKQGNSNV GTSSQLSETQ LAARRAVSLA LNMPMGDNLK ATGQISTAAV  300
GIKSQHQSQK ASAPPPDQQL GRVVPPKPQA PTKWPPMNPT STPDSLVKAA AVAAGARIAT  360
SADASSLIEA ARSQNVVHIT TGGSSMMKSS TASISNQLPS NVHFIRNGLA KAPISTFSSA  420
KPTISRPGEA QQAQAHSTKP ATAAVRPNPV ENSATSIRST ELSKTTQHAV ASTSNQTKEI  480
VQSDQGANPA AERVPQDQSA ALGNQSEVGK HCSPVSGNAL KENSREDQAS TQAKDDRGIL  540
SLSEVEDDGK KSTDNLCASK GNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	6	10	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58220.1	7e-69	MYB_related family protein