PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16022.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HB-other

Protein Properties

Length: 393aa MW: 42846.1 Da PI: 6.5108

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.5	1.9e-07	14	74	7	55
--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55 f++ ++ e+e+ + + p +e e LA++ +++ +qV +WFqNrR+ PIN16022.1 14 FNPVEVGEMEAILQAhnCAVPAREIVEALAQRFsssseragqvEVSSKQVWNWFQNRRYAL 74 6666666777777633378889999999999999999999999***************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MGRPPGNGGP AFRFNPVEVG EMEAILQAHN CAVPAREIVE ALAQRFSSSS ERAGQVEVSS 60 KQVWNWFQNR RYALRARAAK ASVPGQVIVS VAPQEAQAIV KTLPQAPHSQ ASQLQRASST 120 AVRSMPQVPH PLPASSAQYA GNDALENSQM EFEAKSARDG AWYDVALFLS HRSLETGDPE 180 ALVRFAGFGP EEDEWVKIHR HVRQRSLPCE SSECVVVLPG DLVLCFQEGK EQALYFDAHV 240 LDAQRRRHDV RGCRCRILVR YDHDQSEEIV PLRKICRRPE TDYRMKLLHA ESVNVNPQKT 300 DIDSQVGNAL KVDAADGTTQ MQMTTTAMPA NVSVGSETKL QPSKTSNAGT AIAVGETNFS 360 PAAVANATAG DGSSPTMQQG EIEAKISCSD NFV

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MGRPPGNGGP AFRFNPVEVG EMEAILQAHN CAVPAREIVE ALAQRFSSSS ERAGQVEVSS  60
KQVWNWFQNR RYALRARAAK ASVPGQVIVS VAPQEAQAIV KTLPQAPHSQ ASQLQRASST  120
AVRSMPQVPH PLPASSAQYA GNDALENSQM EFEAKSARDG AWYDVALFLS HRSLETGDPE  180
ALVRFAGFGP EEDEWVKIHR HVRQRSLPCE SSECVVVLPG DLVLCFQEGK EQALYFDAHV  240
LDAQRRRHDV RGCRCRILVR YDHDQSEEIV PLRKICRRPE TDYRMKLLHA ESVNVNPQKT  300
DIDSQVGNAL KVDAADGTTQ MQMTTTAMPA NVSVGSETKL QPSKTSNAGT AIAVGETNFS  360
PAAVANATAG DGSSPTMQQG EIEAKISCSD NFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-107	HB-other family protein