PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16071.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 214aa    MW: 24157.9 Da    PI: 6.9132
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16071.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.32.4e-1095139347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+ E+ +++ +  ++G g+Wk+I+ +   ++t+ q+ s+ qky
       PIN16071.1  95 PWTKAEHWRFLIGLDKFGRGDWKSISMHCVGTKTPTQVASHAQKY 139
                      8************************766555*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MESRYSLLEE GLFSELPSLH SEIESKCTSG ENLNLLENCL AGTNQPSPIP ADSNHDSIDG  60
KERENDQIEK TKNTGSPSQV IEKRNNEGQR QRGVPWTKAE HWRFLIGLDK FGRGDWKSIS  120
MHCVGTKTPT QVASHAQKYF ERETNQILLH RRRRSIHDIR TVNPTTAFTP SLPQMGHGDP  180
NLSGTPTVYQ IFNGEIHVHQ NPDFNLPMNP IAHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.13e-28MYB family protein