PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16122.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 226aa    MW: 25510.5 Da    PI: 9.2936
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16122.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B399.81.6e-31461471100
                 EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 f+k ltpsdv+k++rlv+pk++ae++   +g+  ++++l++ede g+ W+++++y+++s+++vltkGW+++vk++gL++gD+v+F +++ ++++l++++
  PIN16122.1  46 FEKLLTPSDVGKLNRLVIPKQHAERNfpmDGDRGNGIMLSFEDEVGKLWSFRYSYWGSSQSFVLTKGWSGYVKEKGLDAGDSVLFGRHR-DGGRLFIGW 143
                 99***************************889999***************************************************654.8999***** PP

                 E-SS CS
          B3  97 frks 100
                 +rk+
  PIN16122.1 144 RRKN 147
                 *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MSIPIFYGGA TTFNYNFYNK NEQELLEEQL VINNQFYYEI PKEPLFEKLL TPSDVGKLNR  60
LVIPKQHAER NFPMDGDRGN GIMLSFEDEV GKLWSFRYSY WGSSQSFVLT KGWSGYVKEK  120
GLDAGDSVLF GRHRDGGRLF IGWRRKNGEV SGGGWWSRHG GSSSAYCPRT GGSGNPKKLR  180
LFGVNMEWGS EPSAQEGSST SSQGRARQRL RGQCCASDRT PLFFDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.16e-57B3 family protein