PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16124.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 177aa    MW: 20433.1 Da    PI: 9.2941
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16124.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B392.43.2e-29461461100
                 EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 f+k lt+sdv+k++rlv+pk++ae++   +g+  ++++l++ede g+ W++++ y+++s++yv + GW++Fvk++gL++gD+v+F +++ ++++l++++
  PIN16124.1  46 FEKLLTSSDVGKLNRLVIPKQHAERNfpmNGDRDNGIMLSFEDEVGKLWSFRYLYWGSSQSYVCK-GWSGFVKEKGLDAGDSVLFGRHR-DGGRLFIGW 142
                 99***************************7788899*************************9988.********************654.8999***** PP

                 E-SS CS
          B3  97 frks 100
                 +rk+
  PIN16124.1 143 RRKN 146
                 *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MSIPIFYGGA TTFNYNFYNK NKQELLEEQL VINNEFYYEI PKEPLFEKLL TSSDVGKLNR  60
LVIPKQHAER NFPMNGDRDN GIMLSFEDEV GKLWSFRYLY WGSSQSYVCK GWSGFVKEKG  120
LDAGDSVLFG RHRDGGRLFI GWRRKNGEVT GGRWWSRHEG SSSAYCPRTG ANRKGCM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.14e-46B3 family protein