PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16140.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 206aa    MW: 22795.5 Da    PI: 8.5007
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16140.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.4e-19553153
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  +
  PIN16140.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAVLM 53
                59*******9.**********8.....334*********************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MVQTKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAA VLMSGRNAKT  60
NFPVPANQEN GDDVSPSSSS SSSSTTPKST SLSSILRAKL RKCCKSPSPS LTCLRLDTEN  120
SHIGVWQKRA GSRSDSNWVM TVELGKKKND DQMMSNSAAA AGEATQENPQ PAAAAENSMQ  180
IIEARDGMDE EERIALQMIE ELLNRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.11e-70ERF family protein