PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16227.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 355aa MW: 37624.6 Da PI: 10.2623

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16227.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125	7.9e-39	61	181	3	117
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......................ssssasec.eaess 78 k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+qa+pai+++tgt s+s+as c + PIN16227.1 61 MKRSSTKDRHTKVEGRGRRIRMPATCAARVFQLTRELGHKSDGETIRWLLEQAEPAIIAATGTgtvpaiamsvngtlkiptttnnSTSAASGCsT---- 155 6999***********************************************************44444433333333333332222222222221.... PP TCP 79 sssasnsssgkaaksaakskksqksaasalnlakesrak 117 +s ++k+++ s++++ +++ s+ PIN16227.1 156 -----------DDPS--HRKRKRPSSSEFIDINTVSHPP 181 ...........1111..2222222222223333333322 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MAERDRAEST RDNKISCYPP LTEAQPLRMA PPTIVSLKEE PETTDDKPTP PTGVVHPPPQ 60 MKRSSTKDRH TKVEGRGRRI RMPATCAARV FQLTRELGHK SDGETIRWLL EQAEPAIIAA 120 TGTGTVPAIA MSVNGTLKIP TTTNNSTSAA SGCSTDDPSH RKRKRPSSSE FIDINTVSHP 180 PSTAAAASTN NFAITNANNS AIISSNNASV SAPLMSVIPI PAMWAIPTVT SNSNSSTPTF 240 LIIPPNQTTQ VVTLQPGGAL NMTPVANISA AGRPISALVA AMQPSGSGVT VAQPVTQIHL 300 QSFQSSIPAV LVDKPSLPSS SNGSASTKTQ MLRDISWEIH DKKEFPFVAT RSAKN

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MAERDRAEST RDNKISCYPP LTEAQPLRMA PPTIVSLKEE PETTDDKPTP PTGVVHPPPQ  60
MKRSSTKDRH TKVEGRGRRI RMPATCAARV FQLTRELGHK SDGETIRWLL EQAEPAIIAA  120
TGTGTVPAIA MSVNGTLKIP TTTNNSTSAA SGCSTDDPSH RKRKRPSSSE FIDINTVSHP  180
PSTAAAASTN NFAITNANNS AIISSNNASV SAPLMSVIPI PAMWAIPTVT SNSNSSTPTF  240
LIIPPNQTTQ VVTLQPGGAL NMTPVANISA AGRPISALVA AMQPSGSGVT VAQPVTQIHL  300
QSFQSSIPAV LVDKPSLPSS SNGSASTKTQ MLRDISWEIH DKKEFPFVAT RSAKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-48	TCP family protein