PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16269.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HD-ZIP

Protein Properties

Length: 230aa MW: 25845.3 Da PI: 8.592

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.1	3.6e-19	74	128	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Lee F++n++++ +++e LA++l+L+ rqV vW+qNrRa+ k PIN16269.1 74 RKKLRLTKEQSRLLEESFRQNHTLNPKQKETLAEQLNLKPRQVEVWYQNRRARSK 128 78889************************************************98 PP
2	HD-ZIP_I/II	117.2	9.6e-38	74	162	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLEesF+++++L+p++K++la++L+l+prqv+vW+qnrRAR k+kq+E+++e+Lkr++ +l+e+n++L+keveeLr+ PIN16269.1 74 RKKLRLTKEQSRLLEESFRQNHTLNPKQKETLAEQLNLKPRQVEVWYQNRRARSKLKQTEMECEYLKRWFGSLTEQNRKLQKEVEELRA 162 69*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MENFPNSNSS CLELTIAMPG GFSSSPSLLS SGESGGNIMK EVPDINQIPS PGLTEEECME 60 EEDESPMNGG PAPRKKLRLT KEQSRLLEES FRQNHTLNPK QKETLAEQLN LKPRQVEVWY 120 QNRRARSKLK QTEMECEYLK RWFGSLTEQN RKLQKEVEEL RAMKVGQPHG GHHLPPTSTL 180 TMCPRCQRVT TTAPYDKGPT TTTAAITTTT NAATKMPFIR SRQSSAACYK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	131	RRARSKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	7e-62	HD-ZIP family protein