PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16288.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ZF-HD
Protein Properties Length: 188aa    MW: 21557.4 Da    PI: 7.8806
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer703.8e-221264356
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56
                 +++Y +Cl+NhAa++  ++vDGCg f +s g +gt++a+ CaAC+CHRnFH+  
   PIN16288.1 12 AITYMQCLRNHAAHTIYYVVDGCGLFEAS-GPNGTPEAMVCAACQCHRNFHKTV 64
                 579*************************9.999******************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MAASNNENIE YAITYMQCLR NHAAHTIYYV VDGCGLFEAS GPNGTPEAMV CAACQCHRNF  60
HKTVVVELPS HFNTQGTNTG TDPAQLPQPQ IAVAGVQEQI HDANNHARGP VIEMNMPPQM  120
AQNWIRQRIT PEQSERLRIH AERNNWKMFR EYSREEVGRI CLEVGIIEVT FKRWINYHRR  180
RRMANNAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.12e-20ZF-HD family protein