PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16309.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 294aa MW: 33005.6 Da PI: 7.5329

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.6	2.8e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv +v+q+G+g+W++++ g++R+ k+c++rw +yl PIN16309.1 14 KGAWTPEEDIMLVSYVQQHGPGNWRAVPTNTGLRRCSKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	45.3	1.9e-14	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E++ ++++ ++lG++ W++Ia+++ Rt++++k++w+++l PIN16309.1 67 RGAFTDHEEKMIIKLQALLGNK-WAAIASYLS-ERTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MGRAPCCDKV GVKKGAWTPE EDIMLVSYVQ QHGPGNWRAV PTNTGLRRCS KSCRLRWTNY 60 LRPGIKRGAF TDHEEKMIIK LQALLGNKWA AIASYLSERT DNDIKNYWNT HLKKKLKRLQ 120 NGSDHQPDGS SRNSVHSRGQ WERRLQADVY TAKQALNDAL SLDPKTTHIS NTKPVQTSSY 180 ASSTENIARL LKEWVKTTPK SEEYSKCSSS SKSGVDLYGE YEALFGFESI ESSSNISGDF 240 SGSSSSSTIV HGGSTDPDPN VIDRLSDLEN WLLDDQGKDY FTDFSSFDEN QDLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	3e-97	MYB family protein