PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16327.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 419aa MW: 46240.7 Da PI: 6.187

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.8	3e-30	196	255	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+ ed +++++tYeg+Hnh+ PIN16327.1 196 MNDGCQWRKYGQKIAKGNPCPRAYYRCTASpSCPVRKQVQRCVEDMSILITTYEGTHNHP 255 58************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MEDVKGCNVG EGKININETC KCSEDATKED EFESTKSEMR GVSEENLRLK TLLQQIEKEY 60 KSLQMKFMDI FHQEFNKNGN PFPEKSCFDQ DQEQELVSLR LGTNPDPTQP KKEDNHMITS 120 TKNDELKLGL ECNLEGLTDK NPGPENYSKK EDDEAGEKWP PGKVLKTQRS GDEEFSQTNV 180 KRARVCVRAK CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTASPSCPV RKQVQRCVED 240 MSILITTYEG THNHPLPLSA TAMASTTAAA ASMLLSGSST SQPSATTNLY TLPPFHTNYS 300 SSSPFPTITL DLTTTATHGG FSLYSPSSRT PATNLSFSSM ESNMVPTVWG NGGFCYGSLP 360 HKNDQKLQSY LEKFNQGSSQ QALTETLTKV ITSDPNFRSV IAAAISSMAT SGGENLGQK

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MEDVKGCNVG EGKININETC KCSEDATKED EFESTKSEMR GVSEENLRLK TLLQQIEKEY  60
KSLQMKFMDI FHQEFNKNGN PFPEKSCFDQ DQEQELVSLR LGTNPDPTQP KKEDNHMITS  120
TKNDELKLGL ECNLEGLTDK NPGPENYSKK EDDEAGEKWP PGKVLKTQRS GDEEFSQTNV  180
KRARVCVRAK CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTASPSCPV RKQVQRCVED  240
MSILITTYEG THNHPLPLSA TAMASTTAAA ASMLLSGSST SQPSATTNLY TLPPFHTNYS  300
SSSPFPTITL DLTTTATHGG FSLYSPSSRT PATNLSFSSM ESNMVPTVWG NGGFCYGSLP  360
HKNDQKLQSY LEKFNQGSSQ QALTETLTKV ITSDPNFRSV IAAAISSMAT SGGENLGQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-82	WRKY family protein