PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN16375.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GRF

Protein Properties

Length: 324aa MW: 35308.1 Da PI: 8.3929

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN16375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77	1.8e-24	48	92	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ PIN16375.1 48 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMHRGRNRSRKPVES 92 79****************************************986 PP
2	QLQ	29.2	3e-11	1	22	16	37
QLQ 16 lAyKyLaanqPvPpeLlqaiqk 37 ++yKyL+a++PvPp+L+++i++ PIN16375.1 1 MIYKYLVAGLPVPPDLVMPIRR 22 8*******************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MIYKYLVAGL PVPPDLVMPI RRSFEALSAR FFHHPSLGYC SYYGKKFDPE PGRCRRTDGK 60 KWRCSKDAHP DSKYCERHMH RGRNRSRKPV ESQSTSQSLS TAMSHISSGC GSSSGSFQGS 120 GNGSFQNMPL YCAVSSEGSS FGSNPTKLHM EPMSYGIDNK EFRYIPGLTP DADDHTFSPE 180 ASGSVGTLGL GSSAGNGTWQ LVPSQVSSAS LLKKKSDSPF LCPSSAPQNI HHAFEPISTA 240 TPKQRQQHCF LGSDIGSPGP VKPEQHAVLP FFSEWPTTKE SWSTLDDDDD GTNKNVFSST 300 QLSISIPRAS SDFSSRNAYS SNNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	8e-38	GRF family protein