PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16414.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family B3
Protein Properties Length: 163aa    MW: 18821.5 Da    PI: 6.7144
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16414.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3413.4e-1320941393
                TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
                ++ lvlp  f+++ +++  +    +l++ +gr+ +v++  +k+ ++ +++++GWk+F+ +n+L  gD++vF+++g   f  +
  PIN16414.1 20 LDKLVLPPAFCRKLKEE--NLEHAILTSHQGRK-KVNV--CKNINGlIIFKEGWKDFAYQNDLSIGDVIVFEHTGGLHF--N 94
                467********999654..44468888888877.6777..55555559************************8775444..3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MDGKYGVTRH FFKFMLPGFL DKLVLPPAFC RKLKEENLEH AILTSHQGRK KVNVCKNING  60
LIIFKEGWKD FAYQNDLSIG DVIVFEHTGG LHFNAIVFDS TACEKQFPEE VNLDEHPEDA  120
EGWYKFYKSN KLKDGDFCIF ELHTDSPRSK TVVMDVQISR HPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.14e-13B3 family protein