PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16450.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 229aa    MW: 25454.2 Da    PI: 10.3472
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.3e-08131171954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PIN16450.1 131 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 171
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MDVDFMNSSA EAHMEMMLLQ MDNPNHIPFT ESIYTGNNIT STMNNDVAIE NLMNPFSGEV  60
HQHPPAQPVL HHHTSGGGRR SGPARNNSMA AMREMIFRIA AMQPVHIDPE SVKPPKRKNV  120
KISTDPQSVA ARHRRERISE RIRILQRLVP GGTKMDTASM LDEAIHYVKF LKNQVQSLER  180
VAGNRPPPPP PIGFPVGMSS GSYFPASVKG SYLLITERSR LAKHASIFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.14e-42bHLH family protein