PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16472.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 234aa    MW: 25548 Da    PI: 8.5005
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.72.1e-20111145135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  PIN16472.1 111 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 145
                 ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MYHTQSNSFS MLFSMANGHR AFDEGEMYTF ATSPSASVDC TLSLGTPSTR LTNDNISHHH  60
HEKKRSSCMS NFGWNILPSK NTSPPSASKS HRGGSNGNAG SGGDPLLARR CANCDTTSTP  120
LWRNGPRGPK SLCNACGIRF KKEERRATAA ASTSNGGATH IDAAAQHTMN NGSWAQPQKT  180
PCYTSAYGNE FRFVEDDVVD HREYSSESGG GNIPFLSWRF NVTDRPSFVH DFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.13e-49GATA family protein